API Reference¶
inspectorcell.Controller () |
Cotrols the app, including data and gui. |
inspectorcell.entities.EntityManager (*args, …) |
|
inspectorcell.entities.EntityFile (buffio, fmt) |
|
inspectorcell.entities.Entity (entity_id) |
Base entity derived from image should be generated by factory only |
inspectorcell.entities.entitytools |
Helpfull tools to edit or generate Entity or EntityManager instances |
inspectorcell.viewer.ViewContext ([parent, …]) |
Holds and generates the views, all manipulation of views and thus the view state over this class |
InspectorCell¶
- Provides
- Isolated datamodel and widged for use in GUI Apps
- Polygon based segmentation of image objects
- Clear display of large multiplexed image stacks
- Utility scripts for integration in existing workflows
Available subpackages¶
viewer
- Widgeds and Graphic objects for GUI apps
entities
- A central interface for safe data generation and manipulation
graphics
- Primitives and graphical elements used by the viewer
graphics
- Primitives and graphical elements used by the viewer
util
- Utility functions not in the core featureset (e.g. image loading)
Utilities¶
- entitytools
- Script to simplify acces to generated data and feature extraction
-
class
inspectorcell.
Controller
¶ Cotrols the app, including data and gui. Every feature should be in principle triggerable by this class
controlls view and entities
-
class
inspectorcell.entities.
EntityManager
(*args, **kwargs)¶
-
class
inspectorcell.entities.
EntityFile
(buffio, fmt)¶
-
class
inspectorcell.entities.
Entity
(entity_id)¶ Base entity derived from image should be generated by factory only
Will be hierarchically ordered. Thus might not have any functions that prevent an atomic use of the entities e.g. as nodes in an hierarchical, ordered tree
Helpfull tools to edit or generate Entity or EntityManager instances
-
class
inspectorcell.viewer.
ViewContext
(parent=None, dataManager=None, entityManager=None)¶ Holds and generates the views, all manipulation of views and thus the view state over this class